Tags¶
Every navigated page in this documentation carries one or more tags from the canon below. Click a tag to jump to every page that uses it. Tags are not applied to docs/features_change/* change notes — those are indexed by date in the Change Log and by release in Releases.
Canon¶
| Tag | Meaning |
|---|---|
overview |
Landing / orientation pages a first-time visitor reads. |
setup |
Pages a researcher or operator needs to deploy or join a deployment for the first time. |
user-guide |
Browser workflow pages a researcher uses day-to-day. |
operate |
Operator surface — deployment, architecture, research notes. |
architecture |
System-level design references (sidecar topology, identity, network). |
infra |
Bicep modules, Container Apps template, AKS / Storage / ACR layout. |
auth |
MSAL, managed identity, RBAC. |
security |
Security hardening, audit follow-ups, threat model. |
blast |
BLAST workflow, results, search-space, NCBI compatibility. |
terminal |
Browser terminal sidecar (xterm.js / ttyd / WebSocket). |
ui |
Dashboard cards, glassmorphism design tokens, accessibility. |
agent |
Pages written for AI coding agents (copilot/*). |
research |
In-progress research notes that informed design decisions. |
contributor |
Conventions and workflows for human contributors. |
release |
Per-release notes, change log, version management. |
agent¶
- Agent Reference
- Auth Flow (Agent Detail)
- Browser Terminal (Agent Detail)
- Codebase Map (Agent Detail)
- Glassmorphic UI Rules
- Monitoring UI (Agent Detail)
- Repository Layout (Agent Detail)
- Resource Plane (Agent Detail)
- Security Audit Follow-up (2026-05-22)
- Version Management
architecture¶
- Architecture
- Auth — MSAL + Managed Identity
- Container Apps Architecture
- High Level Architecture
- Runtime Plan — Networking, Identity, Storage, AKS
- Storage Network Isolation & Browser ↔ Storage Proxy
auth¶
blast¶
- BLAST Search Space Discovery
- New Search (User Guide)
- Recent Searches (User Guide)
- Results (User Guide)
- Web BLAST Compatibility Plan
contributor¶
infra¶
- CLI Rolling Update (git pull + build + deploy)
- Container Apps Architecture
- Deployment Reference
- Runtime Plan — Networking, Identity, Storage, AKS
- Storage Network Isolation & Browser ↔ Storage Proxy
operate¶
overview¶
release¶
research¶
security¶
- Auth — MSAL + Managed Identity
- Runtime Plan — Networking, Identity, Storage, AKS
- Security Audit Follow-up (2026-05-22)
- Storage Network Isolation & Browser ↔ Storage Proxy